ABOUT THIS RECORDspecies: Canis familiaris
miRNA family: mir-708
source: miRBase, original name: cfa-mir-708 (MI0008043)
SEQUENCE & STRUCTURE| miRNA AAGGAGCTTACAATCTAGCTGGG miRNA* CAACTAGACTGTGAGCTTCTAGA mismatches: 4 bulges: 0 |
pre-miRNA
AAGGAGCTTACAATCTAGCTGGGGGTGAACGGCTTGCACATGAACGCAACTAGACTGTGAGCTTCTAGA
dot-bracket secondary structure
.(((((((((((.(((((.((.(.(((.........))).....).)).))))).)))))))))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
AAGGAGCTTACAATCTAGCTGGGGGTGAACGGCTTGCACATGAACGCAACTAGACTGTGAGCTTCTAGA
dot-bracket secondary structure
.(((((((((((.(((((.((.(.(((.........))).....).)).))))).)))))))))))...
SIMILARITIES| miRBase ssc-mir-708: 6e-29 PMRD no hits microPC no hits | UniProt no hits RFAM mir-28: 2e-32 |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N, Nat Biotechnol. 26:407-415(2008)., "Discovering microRNAs from deep sequencing data using miRDeep"
