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ABOUT THIS RECORD
ID:
MNEST026927
species:
Canis familiaris
miRNA family:
mir-1843
source:
miRBase, original name:
cfa-mir-1843
(
MI0008123
)
SEQUENCE & STRUCTURE
miRNA
ACTGGAGGTCTCTGTCTGGCTT
miRNA*
GTCTGATCGTTCCCCTCCATACA
mismatches:
7
bulges:
1
View larger
pre-miRNA
ACTGGAGGTCTCTGTCTGGCTT
AGGACAGCTGGCTAA
GTCTGATCGTTCCCCTCCATACA
dot-bracket secondary structure
..((((((...(.(((.(((((
((..(....).))))
))).))).)....))))))....
SIMILARITIES
miRBase
mmu-mir-1843b
:
5e-20
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
SCARNA3: 2e-22
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Solexa
references
[
1
] Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N,
Nat Biotechnol. 26:407-415(2008).
,
"Discovering microRNAs from deep sequencing data using miRDeep"