ABOUT THIS RECORDspecies: Monodelphis domestica
miRNA family: let-7
source: miRBase, original name: mdo-let-7f-2 (MI0005349)
SEQUENCE & STRUCTURE| miRNA TGAGGTAGTAGATTGTATAGTT miRNA* ATAACTATACAGTCTACTGTCTTTCC mismatches: 3 bulges: 4 |
pre-miRNA
GGGATGAGGTAGTAGATTGTATAGTTTTAGGGTCACACCCGATCTCGGAGATAACTATACAGTCTACTGTCTTTCCCACG
dot-bracket secondary structure
((((.(((..(((((((((((((((((..(((((......)))))..))....)))))))))))))))..)))))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Devor EJ, Samollow PB, J Hered. 99:66-72(2008)., "In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica"
GGGATGAGGTAGTAGATTGTATAGTTTTAGGGTCACACCCGATCTCGGAGATAACTATACAGTCTACTGTCTTTCCCACG
dot-bracket secondary structure
((((.(((..(((((((((((((((((..(((((......)))))..))....)))))))))))))))..)))))))...
SIMILARITIES| miRBase oan-let-7f-2: 2e-35 PMRD no hits microPC no hits | UniProt no hits RFAM let-7: 3e-28 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Devor EJ, Samollow PB, J Hered. 99:66-72(2008)., "In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica"
