ABOUT THIS RECORDspecies: Monodelphis domestica
miRNA family: mir-27
source: miRBase, original name: mdo-mir-27b (MI0005367)
SEQUENCE & STRUCTURE| miRNA TTCACAGTGGCTAAGTTCTGC miRNA* AGAGCTTAGCCGATTGGTGAACA mismatches: 2 bulges: 2 |
pre-miRNA
ACCTCTCTGACAAGGTGCAGAGCTTAGCCGATTGGTGAACAGTCACTGATTTCCTCTTTGTTCACAGTGGCTAAGTTCTGCACCTGAAGAGAAGGGG
dot-bracket secondary structure
.(((((((....((((((((((((((((((....((((((((...............))))))))..))))))))))))))))))..)))).)))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Microarray, PCR
references
[1] Devor EJ, Samollow PB, J Hered. 99:66-72(2008)., "In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica"
ACCTCTCTGACAAGGTGCAGAGCTTAGCCGATTGGTGAACAGTCACTGATTTCCTCTTTGTTCACAGTGGCTAAGTTCTGCACCTGAAGAGAAGGGG
dot-bracket secondary structure
.(((((((....((((((((((((((((((....((((((((...............))))))))..))))))))))))))))))..)))).)))..
SIMILARITIES| miRBase bta-mir-27b: 4e-37 PMRD no hits microPC no hits | UniProt no hits RFAM mir-27: 1e-40 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Microarray, PCR
references
[1] Devor EJ, Samollow PB, J Hered. 99:66-72(2008)., "In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica"
