ABOUT THIS RECORDspecies: Monodelphis domestica
miRNA family: mir-29
source: miRBase, original name: mdo-mir-29a (MI0005353)
SEQUENCE & STRUCTURE| miRNA TAGCACCATTTGAAATCGGT miRNA* TGATTTCTTTTGGTGTTCAGA mismatches: 3 bulges: 1 |
pre-miRNA
ATGACTGATTTCTTTTGGTGTTCAGAGTCAATATCATTTTCTAGCACCATTTGAAATCGGTTAT
dot-bracket secondary structure
((((((((((((...(((((((.((((...........)))))))))))...))))))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Devor EJ, Samollow PB, J Hered. 99:66-72(2008)., "In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica"
ATGACTGATTTCTTTTGGTGTTCAGAGTCAATATCATTTTCTAGCACCATTTGAAATCGGTTAT
dot-bracket secondary structure
((((((((((((...(((((((.((((...........)))))))))))...))))))))))))
SIMILARITIES| miRBase oan-mir-29a-1: 9e-31 PMRD no hits microPC no hits | UniProt no hits RFAM mir-29: 1e-24 |
Identical with: oan-mir-29a-1 from miRBase (MNEST031446) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Devor EJ, Samollow PB, J Hered. 99:66-72(2008)., "In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica"
