ABOUT THIS RECORDspecies: Monodelphis domestica
miRNA family: mir-25
source: miRBase, original name: mdo-mir-92 (MI0005359)
SEQUENCE & STRUCTURE| miRNA TATTGCACTTGTCCCGGCCTG miRNA* GGTTGGGATCAGTTGCAATGCT mismatches: 1 bulges: 1 |
pre-miRNA
CTTTCTACACAGGTTGGGATCAGTTGCAATGCTGTGTCTGTCTGTAGTATTGCACTTGTCCCGGCCTGTTGAGTTTGG
dot-bracket secondary structure
..(((...((((((((((((.(((.((((((((..(......)..))))))))))).)))))))))))).))).....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Microarray, PCR
references
[1] Devor EJ, Samollow PB, J Hered. 99:66-72(2008)., "In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica"
CTTTCTACACAGGTTGGGATCAGTTGCAATGCTGTGTCTGTCTGTAGTATTGCACTTGTCCCGGCCTGTTGAGTTTGG
dot-bracket secondary structure
..(((...((((((((((((.(((.((((((((..(......)..))))))))))).)))))))))))).))).....
SIMILARITIES| miRBase tgu-mir-92-1: 1e-27 PMRD no hits microPC no hits | UniProt no hits RFAM mir-92: 8e-26 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Microarray, PCR
references
[1] Devor EJ, Samollow PB, J Hered. 99:66-72(2008)., "In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica"
