ABOUT THIS RECORDspecies: Monodelphis domestica
miRNA family: mir-187
source: miRBase, original name: mdo-mir-187 (MI0005309)
SEQUENCE & STRUCTURE| miRNA TCGTGTCTTGTGTTGCAGCC miRNA* CTACAACACAGGACACGGGA mismatches: 1 bulges: 0 |
pre-miRNA
ATTGTGAGACCTCTGGCTACAACACAGGACACGGGAGCTTTTCTGAACCCTCGTGTCTTGTGTTGCAGCCAGAGGGGCACA
dot-bracket secondary structure
..((((...(((((((((.((((((((((((((((.(.((....)).).)))))))))))))))).)))))))))..))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Microarray, PCR
references
[1] Devor EJ, Samollow PB, J Hered. 99:66-72(2008)., "In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica"
ATTGTGAGACCTCTGGCTACAACACAGGACACGGGAGCTTTTCTGAACCCTCGTGTCTTGTGTTGCAGCCAGAGGGGCACA
dot-bracket secondary structure
..((((...(((((((((.((((((((((((((((.(.((....)).).)))))))))))))))).)))))))))..))))
SIMILARITIES| miRBase gga-mir-187: 5e-36 PMRD no hits microPC no hits | UniProt no hits RFAM mir-187: 1e-34 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Microarray, PCR
references
[1] Devor EJ, Samollow PB, J Hered. 99:66-72(2008)., "In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica"
