ABOUT THIS RECORDspecies: Monodelphis domestica
miRNA family: mir-8
source: miRBase, original name: mdo-mir-200a (MI0005346)
SEQUENCE & STRUCTURE| miRNA TAACACTGTCTGGTAACGATGT miRNA* ATCTTACTAGACAGTGCTGGA mismatches: 1 bulges: 1 |
pre-miRNA
GGGCCTCTGTGGGCATCTTACTAGACAGTGCTGGATTTTTGGATGTACTCTAACACTGTCTGGTAACGATGTTTAAAGAGGGAACC
dot-bracket secondary structure
((.(((((.(((((((((((((((((((((.((((.............)))).))))))))))))).)))))))).)))))...))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Devor EJ, Samollow PB, J Hered. 99:66-72(2008)., "In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica"
GGGCCTCTGTGGGCATCTTACTAGACAGTGCTGGATTTTTGGATGTACTCTAACACTGTCTGGTAACGATGTTTAAAGAGGGAACC
dot-bracket secondary structure
((.(((((.(((((((((((((((((((((.((((.............)))).))))))))))))).)))))))).)))))...))
SIMILARITIES| miRBase gga-mir-200a: 3e-28 PMRD no hits microPC no hits | UniProt no hits RFAM mir-8: 2e-26 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Devor EJ, Samollow PB, J Hered. 99:66-72(2008)., "In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica"
