ABOUT THIS RECORDspecies: Monodelphis domestica
miRNA family: mir-214
source: miRBase, original name: mdo-mir-214 (MI0005319)
SEQUENCE & STRUCTURE| miRNA ACAGCAGGCACAGACAGGCAG miRNA* GCCTGTCTACACTTGCTGTGC mismatches: 3 bulges: 0 |
pre-miRNA
GGGCTGGCTGGACGGAGTTGTCATGTGTCTGCCTGTCTACACTTGCTGTGCAGAACATCCTCTCACCTGTACAGCAGGCACAGACAGGCAGTCACATGAC
AACCCAGCCT
dot-bracket secondary structure
.....((((((.....(((((((((((.((((((((((...((((((((((((.............))))))))))))...)))))))))).))))))))
))))))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Microarray, PCR
references
[1] Devor EJ, Samollow PB, J Hered. 99:66-72(2008)., "In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica"
GGGCTGGCTGGACGGAGTTGTCATGTGTCTGCCTGTCTACACTTGCTGTGCAGAACATCCTCTCACCTGTACAGCAGGCACAGACAGGCAGTCACATGAC
AACCCAGCCT
dot-bracket secondary structure
.....((((((.....(((((((((((.((((((((((...((((((((((((.............))))))))))))...)))))))))).))))))))
))))))))).
SIMILARITIES| miRBase cfa-mir-214: 1e-53 PMRD no hits microPC no hits | UniProt no hits RFAM mir-214: 3e-54 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Microarray, PCR
references
[1] Devor EJ, Samollow PB, J Hered. 99:66-72(2008)., "In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica"
