ABOUT THIS RECORDspecies: Ateles geoffroyi
miRNA family: mir-30
source: miRBase, original name: age-mir-30b (MI0002507)
SEQUENCE & STRUCTURE| miRNA TGTAAACATCCTACACTCAGC miRNA* TGAGAGGTGGATGTTTACTTC mismatches: 2 bulges: 2 |
pre-miRNA
ACCGAGTTTCAGTTCATGTAAACATCCTACACTCAGCTGTAATACATGGATTGGCTGAGAGGTGGATGTTTACTTCAGCTGACTTGGA
dot-bracket secondary structure
.(((((..((((((...((((((((((.((.((((((((............))))))))..))))))))))))...))))))))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
ACCGAGTTTCAGTTCATGTAAACATCCTACACTCAGCTGTAATACATGGATTGGCTGAGAGGTGGATGTTTACTTCAGCTGACTTGGA
dot-bracket secondary structure
.(((((..((((((...((((((((((.((.((((((((............))))))))..))))))))))))...))))))))))).
SIMILARITIES| miRBase lla-mir-30b: 7e-45 PMRD no hits microPC no hits | UniProt no hits RFAM mir-30: 3e-16 |
Identical with: lla-mir-30b from miRBase (MNEST027555) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
