ABOUT THIS RECORDspecies: Saguinus labiatus
miRNA family: mir-214
source: miRBase, original name: sla-mir-214 (MI0002859)
SEQUENCE & STRUCTURE| miRNA ACAGCAGGCACAGACAGGCAG miRNA* GCCTGTCTACACTTGCTGTGC mismatches: 3 bulges: 0 |
pre-miRNA
TGGCCTGGCTGGACAGAGTTGTCATGTGTCTGCCTGTCTACACTTGCTGTGCAGAACATCCGCTCACCTGTACAGCAGGCACAGACAGGCAGTCACATGAC
AACCCAGCCT
dot-bracket secondary structure
).....((((((.....(((((((((((.((((((((((...((((((((((((.............))))))))))))...)))))))))).))))))))
))))))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
TGGCCTGGCTGGACAGAGTTGTCATGTGTCTGCCTGTCTACACTTGCTGTGCAGAACATCCGCTCACCTGTACAGCAGGCACAGACAGGCAGTCACATGAC
AACCCAGCCT
dot-bracket secondary structure
).....((((((.....(((((((((((.((((((((((...((((((((((((.............))))))))))))...)))))))))).))))))))
))))))))).
SIMILARITIES| miRBase age-mir-214: 6.0E-58 PMRD no hits microPC no hits | UniProt no hits RFAM 4mir-214: 2.0E-52 |
Identical with: mne-mir-214 from miRBase (MNEST028236), eca-mir-214 from miRBase , ppa-mir-214 from miRBase , ptr-mir-214 from miRBase , ppy-mir-214 from miRBase , mml-mir-214 from miRBase , mmu-mir-214 from miRBase , hsa-mir-3120 from miRBase , ggo-mir-214 from miRBase , hsa-mir-214 from miRBase , age-mir-214 from miRBase |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
