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ABOUT THIS RECORD

ID: MNEST027636
species: Macaca mulatta
miRNA family: let-7
source: miRBase, original name: mml-let-7f-1 (MI0007577)

Taxonomy by NCBI:
Macaca mulatta Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAGGTAGTAGATTGTATAGTT

miRNA*
CTATACAATCTATTGCCTTCCC

mismatches: 2
bulges: 0

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pre-miRNA
TCAGAGTGAGGTAGTAGATTGTATAGTTGTGGGGTAGTGATTTTACCCTGTTCAGGAGATAACTATACAATCTATTGCCTTCCCTGA

dot-bracket secondary structure
((((.(..(((((((((((((((((((((((((((((.....))))))).........))))))))))))))))))))))..)))))


SIMILARITIES
miRBase mdo-let-7f-1: 3e-44

PMRD no hits

microPC no hits
UniProt no hits

RFAM let-7: 3e-38

Identical with: ptr-let-7f-1 from miRBase (MNEST030133)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Yue J, Sheng Y, Orwig KE, BMC Genomics. 9:8(2008)., "Identification of novel homologous microRNA genes in the rhesus macaque genome"




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