miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST027642
species: Macaca mulatta
miRNA family: mir-7
source: miRBase, original name: mml-mir-7-1 (MI0007581)

Taxonomy by NCBI:
Macaca mulatta Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGAAGACTAGTGATTTTGTTGT

miRNA*
AACAAATCACAGTCTGCCATA

mismatches: 1
bulges: 2

View larger
pre-miRNA
TTGGATGTTGGCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACTAAATTGACAACAAATCACAGTCTGCCATATGGCACAGGCCAT
GCCTCTACAG


dot-bracket secondary structure
.((((.((((((((.((.((((((((.(((((.(((((((.(((((((((((....)))))..)))))))))))))))))).)))))))).)))))))).
)).))))...



SIMILARITIES
miRBase mne-mir-7-1: 6e-58

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-7: 1e-40

Identical with: mne-mir-7-1 from miRBase (MNEST028166)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references

[1] Yue J, Sheng Y, Orwig KE, BMC Genomics. 9:8(2008)., "Identification of novel homologous microRNA genes in the rhesus macaque genome"




Liczniki na strone;