ABOUT THIS RECORDspecies: Macaca mulatta
miRNA family: mir-17
source: miRBase, original name: mml-mir-18b (MI0007590)
Taxonomy by NCBI:
Macaca mulatta Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAAGGTGCATCTAGTGCAGTTAG miRNA* TACTGCCCTAAATGCCCCTTCTGGC mismatches: 5 bulges: 2 |
pre-miRNA
TGTGTTAAGGTGCATCTAGTGCAGTTAGTGAAGCAGCTTAGAATCTACTGCCCTAAATGCCCCTTCTGGCA
dot-bracket secondary structure
..((((((((.((((.(((.(((((..((.(((...)))...))..))))).))).)))).)))..)))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Yue J, Sheng Y, Orwig KE, BMC Genomics. 9:8(2008)., "Identification of novel homologous microRNA genes in the rhesus macaque genome"
TGTGTTAAGGTGCATCTAGTGCAGTTAGTGAAGCAGCTTAGAATCTACTGCCCTAAATGCCCCTTCTGGCA
dot-bracket secondary structure
..((((((((.((((.(((.(((((..((.(((...)))...))..))))).))).)))).)))..)))))
SIMILARITIES| miRBase hsa-mir-18b: 7e-35 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: ssc-mir-18b from miRBase (MNEST033918) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Yue J, Sheng Y, Orwig KE, BMC Genomics. 9:8(2008)., "Identification of novel homologous microRNA genes in the rhesus macaque genome"
