ABOUT THIS RECORDspecies: Macaca mulatta
miRNA family: mir-17
source: miRBase, original name: mml-mir-93 (MI0003074)
Taxonomy by NCBI:
Macaca mulatta Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAAGTGCTGTTCGTGCAGGTAG miRNA* ACTGCTGAGCTAGCACTTCCC mismatches: 1 bulges: 3 |
pre-miRNA
CTGGGGGCTCCAAAGTGCTGTTCGTGCAGGTAGTGTGATTAACCGACCTACTGCTGAGCTAGCACTTCCCGAGCCCCCAG
dot-bracket secondary structure
((((((((((..((((((((((((.((((.(((..((......))..)))))))))))).)))))))...))))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
CTGGGGGCTCCAAAGTGCTGTTCGTGCAGGTAGTGTGATTAACCGACCTACTGCTGAGCTAGCACTTCCCGAGCCCCCAG
dot-bracket secondary structure
((((((((((..((((((((((((.((((.(((..((......))..)))))))))))).)))))))...))))))))))
SIMILARITIES| miRBase mne-mir-93: 4e-40 PMRD no hits microPC no hits | UniProt no hits RFAM mir-17: 0.0000003 |
Identical with: mne-mir-93 from miRBase (MNEST028199) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
