ABOUT THIS RECORDspecies: Macaca mulatta
miRNA family: let-7
source: miRBase, original name: mml-mir-98 (MI0002696)
Taxonomy by NCBI:
Macaca mulatta Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAGGTAGTAAGTTGTATTGTT miRNA* CTATACAACTTACTACTTTCC mismatches: 2 bulges: 0 |
pre-miRNA
GTGAGGTAGTAAGTTGTATTGTTGTGGGGTAGGGATATTAGGCCCCAATTAGAAGATAACTATACAACTTACTACTTTCC
dot-bracket secondary structure
..(((((((((((((((((.((((((((((...........)))))).........)))).)))))))))))))))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
GTGAGGTAGTAAGTTGTATTGTTGTGGGGTAGGGATATTAGGCCCCAATTAGAAGATAACTATACAACTTACTACTTTCC
dot-bracket secondary structure
..(((((((((((((((((.((((((((((...........)))))).........)))).)))))))))))))))))..
SIMILARITIES| miRBase age-mir-98: 4e-40 PMRD no hits microPC no hits | UniProt no hits RFAM let-7: 4e-34 |
Identical with: ppa-mir-98 from miRBase (MNEST030078) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
