ABOUT THIS RECORDspecies: Macaca mulatta
miRNA family: mir-126
source: miRBase, original name: mml-mir-126 (MI0007616)
Taxonomy by NCBI:
Macaca mulatta Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGTACCGTGAGTAATAATGCG miRNA* ACATTATTACTTTTGGTACGCGC mismatches: 3 bulges: 1 |
pre-miRNA
CGCTGGTGATGGGACATTATTACTTTTGGTACGCGCTGTGACACTTCAAACTCGTACCGTGAGTAATAATGCGCTGTCCACAGCA
dot-bracket secondary structure
.((((..((((((.(((((((((((.(((((((.(...(((....)))..).))))))).)))))))))))).)))))..)))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Yue J, Sheng Y, Orwig KE, BMC Genomics. 9:8(2008)., "Identification of novel homologous microRNA genes in the rhesus macaque genome"
CGCTGGTGATGGGACATTATTACTTTTGGTACGCGCTGTGACACTTCAAACTCGTACCGTGAGTAATAATGCGCTGTCCACAGCA
dot-bracket secondary structure
.((((..((((((.(((((((((((.(((((((.(...(((....)))..).))))))).)))))))))))).)))))..)))).
SIMILARITIES| miRBase hsa-mir-126: 1e-33 PMRD no hits microPC no hits | UniProt no hits RFAM mir-126: 9e-26 |
Identical with: cfa-mir-126 from miRBase (MNEST026692) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Yue J, Sheng Y, Orwig KE, BMC Genomics. 9:8(2008)., "Identification of novel homologous microRNA genes in the rhesus macaque genome"
