ABOUT THIS RECORDspecies: Macaca mulatta
miRNA family: mir-129
source: miRBase, original name: mml-mir-129-2 (MI0012532)
Taxonomy by NCBI:
Macaca mulatta Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTTTTTGCGGTCTGGGCTTGC miRNA* CGGAAGCCCTTACCCCAAAAAGCA mismatches: 3 bulges: 3 |
pre-miRNA
CTGCCCTTCGTGAATCTTTTTGCGGTCTGGGCTTGCTGTACATAACTCAATAGCCGGAAGCCCTTACCCCAAAAAGCATTCGCGGAGGGCGC
dot-bracket secondary structure
..((((((((((((((((((((.(((..(((((((((((..........)))))...))))))..))).))))))).)))))))))))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
CTGCCCTTCGTGAATCTTTTTGCGGTCTGGGCTTGCTGTACATAACTCAATAGCCGGAAGCCCTTACCCCAAAAAGCATTCGCGGAGGGCGC
dot-bracket secondary structure
..((((((((((((((((((((.(((..(((((((((((..........)))))...))))))..))).))))))).)))))))))))))..
SIMILARITIES| miRBase rno-mir-129-2: 7e-45 PMRD no hits microPC no hits | UniProt no hits RFAM mir-129: 3e-26 |
Identical with: ssc-mir-129a from miRBase (MNEST033977) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
