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ABOUT THIS RECORD
ID:
MNEST027733
species:
Macaca mulatta
miRNA family:
mir-133
source:
miRBase, original name:
mml-mir-133c
(
MI0007621
)
Taxonomy by NCBI:
Macaca mulatta
Macaca
Cercopithecinae
Cercopithecidae
Cercopithecoidea
Catarrhini
Simiiformes
Haplorrhini
Primates
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTGGTCCCCTTCAACCAGCTG
miRNA*
GCTGGTAAAATGGAACCAAATC
mismatches:
5
bulges:
0
View larger
pre-miRNA
GGGAGCCAAATGCTTTGCTAGA
GCTGGTAAAATGGAACCAAATC
GACTGTCCAATGGA
TTTGGTCCCCTTCAACCAGCTG
TAGCTGTGCATTGATGGCGC
CG
dot-bracket secondary structure
.((.(((((((((...((((.(
((((((..((.((.((((((((
.(........).))
)))))).)).))..))))))).
))))...)))))..)))).)
).
SIMILARITIES
miRBase
hsa-mir-133a-2
:
4e-53
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-133: 1e-28
Identical with:
ppy-mir-133c
from miRBase (
MNEST030832
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Yue J, Sheng Y, Orwig KE,
BMC Genomics. 9:8(2008).
,
"Identification of novel homologous microRNA genes in the rhesus macaque genome"