ABOUT THIS RECORDspecies: Macaca mulatta
miRNA family: mir-182
source: miRBase, original name: mml-mir-182 (MI0002815)
Taxonomy by NCBI:
Macaca mulatta Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTGGCAATGGTAGAACTCACA miRNA* GTTCTAGACTTGCCAACTA mismatches: 2 bulges: 5 |
pre-miRNA
CACAGCTGCTTGCCTCCCCCTGTTTTTGGCAATGGTAGAACTCACACTGGTGAGGTAATGGGATCCGGTGGTTCTAGACTTGCCAACTACGGGGCGAGGG
CTCAGCCGGCAC
dot-bracket secondary structure
....((((((.(((..(((((((..(((((((.(.((((((...((((((..............))))))))))))..))))))))..)))))).)..))
)..)).))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
CACAGCTGCTTGCCTCCCCCTGTTTTTGGCAATGGTAGAACTCACACTGGTGAGGTAATGGGATCCGGTGGTTCTAGACTTGCCAACTACGGGGCGAGGG
CTCAGCCGGCAC
dot-bracket secondary structure
....((((((.(((..(((((((..(((((((.(.((((((...((((((..............))))))))))))..))))))))..)))))).)..))
)..)).))))..
SIMILARITIES| miRBase hsa-mir-182: 2e-45 PMRD no hits microPC no hits | UniProt no hits RFAM mir-182: 3e-32 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
