ABOUT THIS RECORDspecies: Macaca mulatta
miRNA family: mir-187
source: miRBase, original name: mml-mir-187 (MI0007651)
Taxonomy by NCBI:
Macaca mulatta Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGTGTCTTGTGTTGCAGCCGG miRNA* GGCTACAACACAGGACCCGGG mismatches: 4 bulges: 1 |
pre-miRNA
GGTCAGGCTCACTATGACACAGTGTGAGACCTCGGGCTACAACACAGGACCCGGGTGCTGCTCTGACCCCTCGTGTCTTGTGTTGCAGCCGGAGGGACGC
AGGTCCGCA
dot-bracket secondary structure
((.(..((.((((.......)))).....((((.((((.((((((((((((.(((..(......)..)))..).))))))))))).)))).))))...))
..).))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Yue J, Sheng Y, Orwig KE, BMC Genomics. 9:8(2008)., "Identification of novel homologous microRNA genes in the rhesus macaque genome"
GGTCAGGCTCACTATGACACAGTGTGAGACCTCGGGCTACAACACAGGACCCGGGTGCTGCTCTGACCCCTCGTGTCTTGTGTTGCAGCCGGAGGGACGC
AGGTCCGCA
dot-bracket secondary structure
((.(..((.((((.......)))).....((((.((((.((((((((((((.(((..(......)..)))..).))))))))))).)))).))))...))
..).))...
SIMILARITIES| miRBase mne-mir-187: 3e-57 PMRD no hits microPC no hits | UniProt no hits RFAM mir-187: 9e-39 |
Identical with: mne-mir-187 from miRBase (MNEST028226) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Yue J, Sheng Y, Orwig KE, BMC Genomics. 9:8(2008)., "Identification of novel homologous microRNA genes in the rhesus macaque genome"
