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ABOUT THIS RECORD

ID: MNEST027786
species: Macaca mulatta
miRNA family: mir-193
source: miRBase, original name: mml-mir-193b (MI0007656)

Taxonomy by NCBI:
Macaca mulatta Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AACTGGCCCTCAAAGTCCCGCT

miRNA*
CGGGGTTTTGAGGGCGAGATGA

mismatches: 5
bulges: 0

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pre-miRNA
GTGGTCTCAGAATCGGGGTTTTGAGGGCGAGATGAGTTTATGTTTTATCCAACTGGCCCTCAAAGTCCCGCTTTTGGGGTCAT

dot-bracket secondary structure
(((..(((((((.((((..(((((((((.((.((..(.........)..)).)).)))))))))..)))).)))))))..)))


SIMILARITIES
miRBase hsa-mir-193b: 6e-42

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-193: 1e-40

Identical with: hsa-mir-193b from miRBase (MNEST028503)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Yue J, Sheng Y, Orwig KE, BMC Genomics. 9:8(2008)., "Identification of novel homologous microRNA genes in the rhesus macaque genome"




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