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ABOUT THIS RECORD

ID: MNEST027883
species: Macaca mulatta
miRNA family: mir-154
source: miRBase, original name: mml-mir-377 (MI0007725)

Taxonomy by NCBI:
Macaca mulatta Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATCACACAAAGGCAACTTTTGT

miRNA*
AGAGGTTGCCCTTGGTGAATTC

mismatches: 1
bulges: 2

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pre-miRNA
TTGAGCAGAGGTTGCCCTTGGTGAATTCGCTTTATTTATGTTGAATCACACAAAGGCAACTTTTGTTTG

dot-bracket secondary structure
..((((((((((((((.(((((((.(((((.........).)))))))).))).)))))))))))))).


SIMILARITIES
miRBase cfa-mir-377: 1e-33

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-154: 8e-32

Identical with: bta-mir-377 from miRBase (MNEST033352)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Yue J, Sheng Y, Orwig KE, BMC Genomics. 9:8(2008)., "Identification of novel homologous microRNA genes in the rhesus macaque genome"




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