miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
ABOUT THIS RECORD
ID:
MNEST027894
species:
Macaca mulatta
miRNA family:
mir-379
source:
miRBase, original name:
mml-mir-411
(
MI0007735
)
Taxonomy by NCBI:
Macaca mulatta
Macaca
Cercopithecinae
Cercopithecidae
Cercopithecoidea
Catarrhini
Simiiformes
Haplorrhini
Primates
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAGTAGACCGTATAGCGTACG
miRNA*
TATGTAACACGGTCCACTAAC
mismatches:
3
bulges:
0
View larger
pre-miRNA
TGGTACTTGGAGAGA
TAGTAGACCGTATAGCGTACG
CTTTATCTGTGACG
TATGTAACACGGTCCACTAAC
CCTCAGTATCA
dot-bracket secondary structure
.((((((..(((.(.
((((.((((((.(.(((((((
(.........).))
))))).).)))))).)))).)
.))))))))).
SIMILARITIES
miRBase
eca-mir-411
:
2e-41
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-154: 7e-39
Identical with:
cfa-mir-411
from miRBase (
MNEST026838
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Yue J, Sheng Y, Orwig KE,
BMC Genomics. 9:8(2008).
,
"Identification of novel homologous microRNA genes in the rhesus macaque genome"