ABOUT THIS RECORDspecies: Macaca mulatta
miRNA family: mir-515
source: miRBase, original name: mml-mir-516a-2 (MI0007786)
Taxonomy by NCBI:
Macaca mulatta Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTCTCGAGGAAAGAAGCACTTT miRNA* AGTGTTTCCTTCCCGAGGGTT mismatches: 3 bulges: 1 |
pre-miRNA
TCTCAGGCTGTGACCGTCTCGAGGAAAGAAGCACTTTCTGTTGTCTAAAGAAAAGGAAGTGTTTCCTTCCCGAGGGTTACGGTTTGAGA
dot-bracket secondary structure
(((((((((((((((..((((.((((.((((((((((((....((....))..)))))))))))).)))))))))))))))))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Yue J, Sheng Y, Orwig KE, BMC Genomics. 9:8(2008)., "Identification of novel homologous microRNA genes in the rhesus macaque genome"
TCTCAGGCTGTGACCGTCTCGAGGAAAGAAGCACTTTCTGTTGTCTAAAGAAAAGGAAGTGTTTCCTTCCCGAGGGTTACGGTTTGAGA
dot-bracket secondary structure
(((((((((((((((..((((.((((.((((((((((((....((....))..)))))))))))).)))))))))))))))))))))))
SIMILARITIES| miRBase mml-mir-516a-1: 2e-45 PMRD no hits microPC no hits | UniProt no hits RFAM mir-515: 3e-44 |
Identical with: mml-mir-516a-1 from miRBase (MNEST027965) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Yue J, Sheng Y, Orwig KE, BMC Genomics. 9:8(2008)., "Identification of novel homologous microRNA genes in the rhesus macaque genome"
