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ABOUT THIS RECORD

ID: MNEST027990
species: Macaca mulatta
miRNA family: mir-541
source: miRBase, original name: mml-mir-541 (MI0012541)

Taxonomy by NCBI:
Macaca mulatta Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAAGGATTCTGCTGTCGGTCCCACT

miRNA*
TGGTGGGCACAGAATCCGGACT

mismatches: 5
bulges: 3

View larger
pre-miRNA
ACGTCAGGGAAAGGATTCTGCTGTCGGTCCCACTCCAAAGTGCATAGAATGGGTGGTGGGCACAGAATCCGGACTCTGCTTGTG

dot-bracket secondary structure
(((.(((((...((((((((.((((.(..((((.(((............)))))))).))))))))))))...)))))..))).


SIMILARITIES
miRBase hsa-mir-541: 2e-35

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-541: 4e-28

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"




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