miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST028008
species:
Macaca mulatta
miRNA family:
mir-553
source:
miRBase, original name:
mml-mir-553
(
MI0007830
)
Taxonomy by NCBI:
Macaca mulatta
Macaca
Cercopithecinae
Cercopithecidae
Cercopithecoidea
Catarrhini
Simiiformes
Haplorrhini
Primates
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AAAAAGGTGAGGTTTTGTTTT
miRNA*
GAGAAAATCTCACTGTTTTA
mismatches:
4
bulges:
1
View larger
pre-miRNA
CTTCAATTTTATTTG
AAAAAGGTGAGGTTTTGTTTT
GTCT
GAGAAAATCTCACTGTTTTA
GACTGAGG
dot-bracket secondary structure
(((((......((((
(((..(((((((((((.((..
....
)).))))))))))).)))))
)).)))))
SIMILARITIES
miRBase
hsa-mir-553
:
1e-23
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-553: 7e-32
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Yue J, Sheng Y, Orwig KE,
BMC Genomics. 9:8(2008).
,
"Identification of novel homologous microRNA genes in the rhesus macaque genome"