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ABOUT THIS RECORD
ID:
MNEST028019
species:
Macaca mulatta
miRNA family:
mir-548
source:
miRBase, original name:
mml-mir-570
(
MI0007840
)
Taxonomy by NCBI:
Macaca mulatta
Macaca
Cercopithecinae
Cercopithecidae
Cercopithecoidea
Catarrhini
Simiiformes
Haplorrhini
Primates
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CAAAAGTAGCAATTACCTTTGC
miRNA*
AAACGTAATTGCAGTTTTTGCC
mismatches:
3
bulges:
0
View larger
pre-miRNA
TATTAGGTTGGTGC
AAACGTAATTGCAGTTTTTGCC
ATTACTTTTAAAGG
CAAAAGTAGCAATTACCTTTGC
ACCAACCT
dot-bracket secondary structure
....((((((((((
(((.((((((((..((((((((
.(((....))).))
))))))..)))))))).)))))
))))))))
SIMILARITIES
miRBase
hsa-mir-548aj-2
:
1e-18
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-548: 2e-20
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Yue J, Sheng Y, Orwig KE,
BMC Genomics. 9:8(2008).
,
"Identification of novel homologous microRNA genes in the rhesus macaque genome"