miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST028040
species: Macaca mulatta
miRNA family: mir-593
source: miRBase, original name: mml-mir-593 (MI0007857)

Taxonomy by NCBI:
Macaca mulatta Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTCTCTGCTGGGGTTTCT

miRNA*


mismatches: 5
bulges: 7

View larger
pre-miRNA
CCCCCAGAGTGTGTCAGGCATCAGCCAGGCATCGCTCAGCCCCTTTCCCTCTGGGGGAGCAAGGAGTGGTGCTGGGTTTGTCTCTGCTGGGGTTTCTCCT


dot-bracket secondary structure
.((((((((......(((((..((((.((((((((((.(((((((.......))))).))...)))))))))).))))))))))).))))))........



SIMILARITIES
miRBase ppy-mir-593: 3e-47

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-593: 9e-51

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references

[1] Yue J, Sheng Y, Orwig KE, BMC Genomics. 9:8(2008)., "Identification of novel homologous microRNA genes in the rhesus macaque genome"




Liczniki na strone;