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ABOUT THIS RECORD
ID:
MNEST028108
species:
Macaca mulatta
miRNA family:
mir-671
source:
miRBase, original name:
mml-mir-671
(
MI0007907
)
Taxonomy by NCBI:
Macaca mulatta
Macaca
Cercopithecinae
Cercopithecidae
Cercopithecoidea
Catarrhini
Simiiformes
Haplorrhini
Primates
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGGAAGCCCTGGAGGGGCTGGAG
miRNA*
CCGGTTCTCAGGGCTCCACC
mismatches:
1
bulges:
3
View larger
pre-miRNA
GCAGGTGAACTGGCAGGCCAGGAAGAGG
AGGAAGCCCTGGAGGGGCTGGAG
GTGATGGATGTTTTCCT
CCGGTTCTCAGGGCTCCACC
TCTTTCGGGCCG
TAGAGCCAGGGCTGGTGC
dot-bracket secondary structure
(((...(..(((((.((((.((((((((
.(((.((((((..((((((((((
(.(((....)))..)))
))))))))))))))))).))
)))))).)))).
....)))))..)...)))
SIMILARITIES
miRBase
mml-mir-671
:
1e-62
PMRD
no hits
microPC
no hits
UniProt
sp|Q9P2E5|CHPF2_HUMAN: 0.00003
RFAM
mir-671: 4e-32
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Yue J, Sheng Y, Orwig KE,
BMC Genomics. 9:8(2008).
,
"Identification of novel homologous microRNA genes in the rhesus macaque genome"