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ABOUT THIS RECORD

ID: MNEST028155
species: Macaca mulatta
miRNA family: mir-1225
source: miRBase, original name: mml-mir-1225 (MI0006312)

Taxonomy by NCBI:
Macaca mulatta Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTGAGCCCCTGTGCCGCCCCCAG

miRNA*
GGGGGGGAGAGGGACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGAC

mismatches: 2
bulges: 31

View larger
pre-miRNA
GTGGGTACGGCCCAGTGGGGGGGAGAGGGACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGACTGACTGAGCCCCTGTGCCGCCCCCAG

dot-bracket secondary structure
.((((.....)))).(((((((((.((((...((((((((((...))))))))))..(((((.....))).)))))).).)).)))))).


SIMILARITIES
miRBase mml-mir-1225: 1e-33

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-1225: 3e-32

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned

references

[1] Berezikov E, Chung WJ, Willis J, Cuppen E, Lai EC, Mol Cell. 28:328-336(2007)., "Mammalian mirtron genes"




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