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ABOUT THIS RECORD
ID:
MNEST028155
species:
Macaca mulatta
miRNA family:
mir-1225
source:
miRBase, original name:
mml-mir-1225
(
MI0006312
)
Taxonomy by NCBI:
Macaca mulatta
Macaca
Cercopithecinae
Cercopithecidae
Cercopithecoidea
Catarrhini
Simiiformes
Haplorrhini
Primates
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTGAGCCCCTGTGCCGCCCCCAG
miRNA*
GGGGGGGAGAGGGACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGAC
mismatches:
2
bulges:
31
View larger
pre-miRNA
GTGGGTACGGCCCAGT
GGGGGGGAGAGGGACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGAC
TGA
CTGAGCCCCTGTGCCGCCCCCAG
dot-bracket secondary structure
.((((.....)))).(
((((((((.((((...((((((((((...))))))))))..(((((..
...
))).)))))).).)).)))))).
SIMILARITIES
miRBase
mml-mir-1225
:
1e-33
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-1225: 3e-32
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
cloned
references
[
1
] Berezikov E, Chung WJ, Willis J, Cuppen E, Lai EC,
Mol Cell. 28:328-336(2007).
,
"Mammalian mirtron genes"