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ABOUT THIS RECORD

ID: MNEST028156
species: Macaca mulatta
miRNA family: mir-1226
source: miRBase, original name: mml-mir-1226 (MI0006315)

Taxonomy by NCBI:
Macaca mulatta Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCACCAGCCCTGTGTTCCCTAG

miRNA*
AGGGCATGCAGGCCTGGATGGGG

mismatches: 4
bulges: 1

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pre-miRNA
GTGAGGGCATGCAGGCCTGGATGGGGCAGCTGGGATGGTCCAAAAGGGTGGCCTCACCAGCCCTGTGTTCCCTAG

dot-bracket secondary structure
...((((.(((((((.((((.((((((.(((.((.....)).....))).)))))))))).))))))).))))..


SIMILARITIES
miRBase hsa-mir-1226: 3e-37

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-1226: 6e-36

Identical with: hsa-mir-1226 from miRBase (MNEST029073)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned

references

[1] Berezikov E, Chung WJ, Willis J, Cuppen E, Lai EC, Mol Cell. 28:328-336(2007)., "Mammalian mirtron genes"




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