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ABOUT THIS RECORD

ID: MNEST028160
species: Macaca mulatta
miRNA family: mir-1233
source: miRBase, original name: mml-mir-1233 (MI0012546)

Taxonomy by NCBI:
Macaca mulatta Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAGCCCTGTCCTCCCGCAG

miRNA*
GTGGGAGGCCAGGGCAGGGCAGG

mismatches: 4
bulges: 3

View larger
pre-miRNA
GTGAGTGGGAGGCCAGGGCAGGGCAGGGGGAGCTGCAGGGCCTTCGGAGGGGCCCCAGCGTCTGAGCCCTGTCCTCCCGCAG

dot-bracket secondary structure
....((((((((.((((((....((((....((((..((((((......)))))))))).)))).)))))).))))))))..


SIMILARITIES
miRBase ptr-mir-1233-1: 3e-34

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references

[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"




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