ABOUT THIS RECORDspecies: Macaca nemestrina
miRNA family: mir-24
source: miRBase, original name: mne-mir-24-2 (MI0003058)
Taxonomy by NCBI:
Macaca nemestrina Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGCTCAGTTCAGCAGGAACAG miRNA* GTGCCTACTGAGCTGAAACACAGT mismatches: 5 bulges: 2 |
pre-miRNA
CTCTGCCTCCCGTGCCTACTGAGCTGAAACACAGTTGGTTTGTGCACACTGGCTCAGTTCAGCAGGAACAGGA
dot-bracket secondary structure
.......(((.((.(((.(((((((((....((((..((....))..))))..))))))))).))).)).)))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
CTCTGCCTCCCGTGCCTACTGAGCTGAAACACAGTTGGTTTGTGCACACTGGCTCAGTTCAGCAGGAACAGGA
dot-bracket secondary structure
.......(((.((.(((.(((((((((....((((..((....))..))))..))))))))).))).)).)))
SIMILARITIES| miRBase mml-mir-24-2: 5e-36 PMRD no hits microPC no hits | UniProt no hits RFAM mir-24: 5e-24 |
Identical with: mml-mir-24-2 from miRBase (MNEST027668) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
