ABOUT THIS RECORDspecies: Macaca nemestrina
miRNA family: mir-17
source: miRBase, original name: mne-mir-106b (MI0003081)
Taxonomy by NCBI:
Macaca nemestrina Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAAAGTGCTGACAGTGCAGAT miRNA* CGCACTGTGGGTACTTGCTG mismatches: 5 bulges: 0 |
pre-miRNA
CCTGCTGGGGCTAAAGTGCTGACAGTGCAGATAGTGGTCCTCTCCGTGCTACCGCACTGTGGGTACTTGCTGCTCCAGCAGG
dot-bracket secondary structure
(((((((((((..(((((((.(((((((.(.((((((......))..))))).))))))).)))))))...)))))))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
CCTGCTGGGGCTAAAGTGCTGACAGTGCAGATAGTGGTCCTCTCCGTGCTACCGCACTGTGGGTACTTGCTGCTCCAGCAGG
dot-bracket secondary structure
(((((((((((..(((((((.(((((((.(.((((((......))..))))).))))))).)))))))...)))))))))))
SIMILARITIES| miRBase mml-mir-106b: 2e-41 PMRD no hits microPC no hits | UniProt no hits RFAM mir-17: 1e-37 |
Identical with: mml-mir-106b from miRBase (MNEST027712) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
