ABOUT THIS RECORDspecies: Gorilla gorilla
miRNA family: mir-19
source: miRBase, original name: ggo-mir-19b-1 (MI0002969)
SEQUENCE & STRUCTURE| miRNA TGTGCAAATCCATGCAAAACTGA miRNA* AGTTTTGCAGGTTTGCATCCAGC mismatches: 0 bulges: 4 |
pre-miRNA
CACTGTTCTATGGTTAGTTTTGCAGGTTTGCATCCAGCTGTGTGATATTCTGCTGTGCAAATCCATGCAAAACTGACTGTGGTAGTG
dot-bracket secondary structure
(((((..(((((((((((((((((((((((((..((((.............)))))))))).)).))))))))))))))))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
CACTGTTCTATGGTTAGTTTTGCAGGTTTGCATCCAGCTGTGTGATATTCTGCTGTGCAAATCCATGCAAAACTGACTGTGGTAGTG
dot-bracket secondary structure
(((((..(((((((((((((((((((((((((..((((.............)))))))))).)).))))))))))))))))))))))
SIMILARITIES| miRBase age-mir-19b-1: 3e-44 PMRD no hits microPC no hits | UniProt no hits RFAM mir-19: 2e-29 |
Identical with: sla-mir-19b-1 from miRBase (MNEST027594) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
