ABOUT THIS RECORDspecies: Gorilla gorilla
miRNA family: mir-125
source: miRBase, original name: ggo-mir-125b-2 (MI0002574)
SEQUENCE & STRUCTURE| miRNA TCCCTGAGACCCTAACTTGTGA miRNA* ACAAGTCAGGCTCTTGGGACCT mismatches: 6 bulges: 0 |
pre-miRNA
ACCAGACTTTTCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGGGA
dot-bracket secondary structure
.((...(((..(((((..((..(((.(((.((((((((..(((....)))...)))))))).))).)))..))..)))))..))).)).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
ACCAGACTTTTCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGGGA
dot-bracket secondary structure
.((...(((..(((((..((..(((.(((.((((((((..(((....)))...)))))))).))).)))..))..)))))..))).)).
SIMILARITIES| miRBase age-mir-125b-2: 2e-45 PMRD no hits microPC no hits | UniProt no hits RFAM lin-4: 4e-28 |
Identical with: cfa-mir-125b-2 from miRBase (MNEST026691) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
