ABOUT THIS RECORDspecies: Gorilla gorilla
miRNA family: mir-181
source: miRBase, original name: ggo-mir-181c (MI0002813)
SEQUENCE & STRUCTURE| miRNA AACATTCAACCTGTCGGTGAGT miRNA* CATCGACCGTTGAGTGGACC mismatches: 3 bulges: 2 |
pre-miRNA
CGGAAAATTTGCCAAGGGTTTGGGGGAACATTCAACCTGTCGGTGAGTTTGGGCAGCTCAGGCAAACCATCGACCGTTGAGTGGACCCTGAGGCCTGGAA
TTGCCATCCT
dot-bracket secondary structure
.(((.......(((.((.((..(((...((((((((..(((((((.(((((...........)))))))))))).))))))))..)))..)).)))))..
......))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
CGGAAAATTTGCCAAGGGTTTGGGGGAACATTCAACCTGTCGGTGAGTTTGGGCAGCTCAGGCAAACCATCGACCGTTGAGTGGACCCTGAGGCCTGGAA
TTGCCATCCT
dot-bracket secondary structure
.(((.......(((.((.((..(((...((((((((..(((((((.(((((...........)))))))))))).))))))))..)))..)).)))))..
......))).
SIMILARITIES| miRBase hsa-mir-181c: 6e-58 PMRD no hits microPC no hits | UniProt no hits RFAM mir-181: 5e-31 |
Identical with: ptr-mir-181c from miRBase (MNEST030255) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
