ABOUT THIS RECORDspecies: Gorilla gorilla
miRNA family: mir-183
source: miRBase, original name: ggo-mir-183 (MI0003088)
SEQUENCE & STRUCTURE| miRNA TATGGCACTGGTAGAATTCACTG miRNA* GTGAATTACCGAAGGGCCATAAA mismatches: 2 bulges: 4 |
pre-miRNA
CCGCAGAGTGTGACTCCTGTTCTGTGTATGGCACTGGTAGAATTCACTGTGAACAGTCTCAGTCAGTGAATTACCGAAGGGCCATAAACAGAGCAGAGAC
AGATCCACGA
dot-bracket secondary structure
.......(((.((.(((((((((((.((((((..(((((..(((((((((((......)))..)))))))))))))....)))))).))))))))).)).
...)))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
CCGCAGAGTGTGACTCCTGTTCTGTGTATGGCACTGGTAGAATTCACTGTGAACAGTCTCAGTCAGTGAATTACCGAAGGGCCATAAACAGAGCAGAGAC
AGATCCACGA
dot-bracket secondary structure
.......(((.((.(((((((((((.((((((..(((((..(((((((((((......)))..)))))))))))))....)))))).))))))))).)).
...)))))..
SIMILARITIES| miRBase hsa-mir-183: 6e-58 PMRD no hits microPC no hits | UniProt no hits RFAM mir-183: 1e-47 |
Identical with: ptr-mir-183 from miRBase (MNEST030258) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
