ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-103
source: miRBase, original name: hsa-mir-103b-2 (MI0007262)
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATAGCCCTGTACAATGCTGCT miRNA* CAGCACTGTAAAGAAGCTGA mismatches: 6 bulges: 1 |
pre-miRNA
ATCATAGCCCTGTACAATGCTGCTTGACCTGAATGCTACAAGGCAGCACTGTAAAGAAGCTGA
dot-bracket secondary structure
)...((((.((.((((.((((((((...............)))))))).)))).))..)))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: ChIP-seq
references
[1] Azuma-Mukai A, Oguri H, Mituyama T, Qian ZR, Asai K, Siomi H, Siomi MC, Proc Natl Acad Sci U S A. 105:7964-7969(2008)., "Characterization of endogenous human Argonautes and their miRNA partners in RNA silencing"
ATCATAGCCCTGTACAATGCTGCTTGACCTGAATGCTACAAGGCAGCACTGTAAAGAAGCTGA
dot-bracket secondary structure
)...((((.((.((((.((((((((...............)))))))).)))).))..)))).
SIMILARITIES| miRBase cfa-mir-103-2: 1.0E-29 PMRD no hits microPC no hits | UniProt no hits RFAM 3mir-103: 3.0E-28 |
Identical with: eca-mir-103 from miRBase (MNEST027000), rno-mir-103-2 from miRBase , mml-mir-103-2 from miRBase , bta-mir-103-2 from miRBase , ssc-mir-103-2 from miRBase , cfa-mir-103-2 from miRBase , ptr-mir-103-2 from miRBase , hsa-mir-103a-2 from miRBase , ppy-mir-103-2 from miRBase , mmu-mir-103-2 from miRBase |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: ChIP-seq
references
[1] Azuma-Mukai A, Oguri H, Mituyama T, Qian ZR, Asai K, Siomi H, Siomi MC, Proc Natl Acad Sci U S A. 105:7964-7969(2008)., "Characterization of endogenous human Argonautes and their miRNA partners in RNA silencing"
