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ABOUT THIS RECORD

ID: MNEST028611
species: Homo sapiens
miRNA family: mir-290
source: miRBase, original name: hsa-mir-372 (MI0000780)

Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAAGTGCTGCGACATTTGAGCGT

miRNA*
CTCAAATGTGGAGCACTATTCT

mismatches: 1
bulges: 3

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pre-miRNA
GTGGGCCTCAAATGTGGAGCACTATTCTGATGTCCAAGTGGAAAGTGCTGCGACATTTGAGCGTCAC

dot-bracket secondary structure
...((((((((((((.(((((((.((((...........)))))))))).).))))))))).)))..


SIMILARITIES
miRBase ppy-mir-372: 2e-32

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-290: 7e-23

Identical with: ppy-mir-372 from miRBase (MNEST030976)

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned, Northern

references

[1] Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M, Cell. 129:1401-1414(2007)., "A mammalian microRNA expression atlas based on small RNA library sequencing"
[2] Suh MR, Lee Y, Kim JY, Kim SK, Moon SH, Lee JY, Cha KY, Chung HM, Yoon HS, Moon SY, Kim VN, Kim KS, Dev Biol. 270:488-498(2004)., "Human embryonic stem cells express a unique set of microRNAs"




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