ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-506
source: miRBase, original name: hsa-mir-511-1 (MI0003127)
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTGTCTTTTGCTCTGCAGTCA miRNA* AATGTGTAGCAAAAGACAGAA mismatches: 4 bulges: 0 |
pre-miRNA
CAATAGACACCCATCGTGTCTTTTGCTCTGCAGTCAGTAAATATTTTTTTGTGAATGTGTAGCAAAAGACAGAATGGTGGTCCATTG
dot-bracket secondary structure
((((.(((..((((..(((((((((((..(((.(((.((((......))))))).)))..)))))))))))..))))..))).))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: array-cloned
references
[1] Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z, Nat Genet. 37:766-770(2005)., "Identification of hundreds of conserved and nonconserved human microRNAs"
CAATAGACACCCATCGTGTCTTTTGCTCTGCAGTCAGTAAATATTTTTTTGTGAATGTGTAGCAAAAGACAGAATGGTGGTCCATTG
dot-bracket secondary structure
((((.(((..((((..(((((((((((..(((.(((.((((......))))))).)))..)))))))))))..))))..))).))))
SIMILARITIES| miRBase hsa-mir-511-2: 9e-32 PMRD no hits microPC no hits | UniProt no hits RFAM mir-506: 2e-23 |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: array-cloned
references
[1] Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z, Nat Genet. 37:766-770(2005)., "Identification of hundreds of conserved and nonconserved human microRNAs"
