ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-762
source: miRBase, original name: hsa-mir-762 (MI0003892)
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGGGCTGGGGCCGGGGCCGAGC miRNA* CTCGGCCCGTACAGTCCGGC mismatches: 2 bulges: 4 |
pre-miRNA
GGCCCGGCTCCGGGTCTCGGCCCGTACAGTCCGGCCGGCCATGCTGGCGGGGCTGGGGCCGGGGCCGAGCCCGCGGCGGGGCC
dot-bracket secondary structure
(((((.(((.((((.((((((((((.((((((.((((((...)))))).))))))..))..)))))))))))).))).)))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: RAKE
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
[2] Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E, Genome Res. 16:1289-1298(2006)., "Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis"
GGCCCGGCTCCGGGTCTCGGCCCGTACAGTCCGGCCGGCCATGCTGGCGGGGCTGGGGCCGGGGCCGAGCCCGCGGCGGGGCC
dot-bracket secondary structure
(((((.(((.((((.((((((((((.((((((.((((((...)))))).))))))..))..)))))))))))).))).)))))
SIMILARITIES| miRBase ptr-mir-762: 0.000000001 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: RAKE
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
[2] Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E, Genome Res. 16:1289-1298(2006)., "Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis"
