ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-802
source: miRBase, original name: hsa-mir-802 (MI0003906)
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAGTAACAAAGATTCATCCTTGT miRNA* AAGGAGAATCTTTGTCACTTAG mismatches: 2 bulges: 1 |
pre-miRNA
GTTCTGTTATTTGCAGTCAGTAACAAAGATTCATCCTTGTGTCCATCATGCAACAAGGAGAATCTTTGTCACTTAGTGTAATTAATAGCTGGAC
dot-bracket secondary structure
...((((((.(((((.(.(((.((((((((((.(((((((((.......)).))))))))))))))))).))).).))))).))))))......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: miRAP-cloned
references
[1] Takada S, Berezikov E, Yamashita Y, Lagos-Quintana M, Kloosterman WP, Enomoto M, Hatanaka H, Fujiwara S, Watanabe H, Soda M, Choi YL, Plasterk RH, Cuppen E, Mano H, Nucleic Acids Res. 34:e115(2006)., "Mouse microRNA profiles determined with a new and sensitive cloning method"
GTTCTGTTATTTGCAGTCAGTAACAAAGATTCATCCTTGTGTCCATCATGCAACAAGGAGAATCTTTGTCACTTAGTGTAATTAATAGCTGGAC
dot-bracket secondary structure
...((((((.(((((.(.(((.((((((((((.(((((((((.......)).))))))))))))))))).))).).))))).))))))......
SIMILARITIES| miRBase ptr-mir-802: 2e-45 PMRD no hits microPC no hits | UniProt no hits RFAM mir-802: 2e-42 |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: miRAP-cloned
references
[1] Takada S, Berezikov E, Yamashita Y, Lagos-Quintana M, Kloosterman WP, Enomoto M, Hatanaka H, Fujiwara S, Watanabe H, Soda M, Choi YL, Plasterk RH, Cuppen E, Mano H, Nucleic Acids Res. 34:e115(2006)., "Mouse microRNA profiles determined with a new and sensitive cloning method"
