ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-936
source: miRBase, original name: hsa-mir-936 (MI0005758)
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACAGTAGAGGGAGGAATCGCAG miRNA* GAGAGACCTTGCTTCTACTTTACCAGGTCC mismatches: 3 bulges: 8 |
pre-miRNA
TCAAGGCCACTGGGACAGTAGAGGGAGGAATCGCAGAAATCACTCCAGGAGCAACTGAGAGACCTTGCTTCTACTTTACCAGGTCCTGCTGGCCCAGA
dot-bracket secondary structure
....(((((..(((((((((((((((((..((.(((...((.(....)))....))).))..)))).)))))))).......)))))..)))))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Lui WO, Pourmand N, Patterson BK, Fire A, Cancer Res. 67:6031-6043(2007)., "Patterns of known and novel small RNAs in human cervical cancer"
TCAAGGCCACTGGGACAGTAGAGGGAGGAATCGCAGAAATCACTCCAGGAGCAACTGAGAGACCTTGCTTCTACTTTACCAGGTCCTGCTGGCCCAGA
dot-bracket secondary structure
....(((((..(((((((((((((((((..((.(((...((.(....)))....))).))..)))).)))))))).......)))))..)))))....
SIMILARITIES| miRBase ptr-mir-936: 3e-50 PMRD no hits microPC no hits | UniProt no hits RFAM mir-936: 9e-45 |
Identical with: ptr-mir-936 from miRBase (MNEST030622) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Lui WO, Pourmand N, Patterson BK, Fire A, Cancer Res. 67:6031-6043(2007)., "Patterns of known and novel small RNAs in human cervical cancer"
