ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-939
source: miRBase, original name: hsa-mir-939 (MI0005761)
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGGGAGCTGAGGCTCTGGGGGTG miRNA* ACCCTGGGCCTCTGCTCCCCAGT mismatches: 5 bulges: 1 |
pre-miRNA
TGTGGGCAGGGCCCTGGGGAGCTGAGGCTCTGGGGGTGGCCGGGGCTGACCCTGGGCCTCTGCTCCCCAGTGTCTGACCGCG
dot-bracket secondary structure
.((((...((((.(((((((((.(((((.(..(((..(((....)))..)))..)))))).))))))))).))))..)))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Lui WO, Pourmand N, Patterson BK, Fire A, Cancer Res. 67:6031-6043(2007)., "Patterns of known and novel small RNAs in human cervical cancer"
TGTGGGCAGGGCCCTGGGGAGCTGAGGCTCTGGGGGTGGCCGGGGCTGACCCTGGGCCTCTGCTCCCCAGTGTCTGACCGCG
dot-bracket secondary structure
.((((...((((.(((((((((.(((((.(..(((..(((....)))..)))..)))))).))))))))).))))..)))).
SIMILARITIES| miRBase ptr-mir-939: 9e-41 PMRD no hits microPC no hits | UniProt no hits RFAM mir-939: 1e-34 |
Identical with: ptr-mir-939 from miRBase (MNEST030625) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Lui WO, Pourmand N, Patterson BK, Fire A, Cancer Res. 67:6031-6043(2007)., "Patterns of known and novel small RNAs in human cervical cancer"
