miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST029042
species: Homo sapiens
miRNA family: mir-941
source: miRBase, original name: hsa-mir-941-3 (MI0005765)

Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CACCCGGCTGTGTGCACATGTGC

miRNA*
ACATGTGCCCAGGGCCCGGGACAGCG

mismatches: 3
bulges: 3

View larger
pre-miRNA
CACGGAAGAGGACGCACCCGGCTGTGTGCACATGTGCCCAGGGCCCGGGACAGCGCCACGGAAGAGGACGCACCCGGCTGTGTGCACATGTGCCCAGGGC
CCGGGACAGCGCCATGG


dot-bracket secondary structure
..(....).((.(((.(((((((.((.((((((((((.((.((((.(((...(((((.(....).)).))).))))))).)).)))))))))).)).)).
)))))...)))))....



SIMILARITIES
miRBase hsa-mir-941-2: 3e-60

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-941: 2e-39

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned, SOLiD

references

[1] Goff LA, Davila J, Swerdel MR, Moore JC, Cohen RI, Wu H, Sun YE, Hart RP, PLoS One. 4:e7192(2009)., "Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors"
[2] Lui WO, Pourmand N, Patterson BK, Fire A, Cancer Res. 67:6031-6043(2007)., "Patterns of known and novel small RNAs in human cervical cancer"




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