miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST029046
species: Homo sapiens
miRNA family: mir-944
source: miRBase, original name: hsa-mir-944 (MI0005769)

Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAATTATTGTACATCGGATGAG

miRNA*
CATCTGATATACAATATTTTCT

mismatches: 2
bulges: 0

View larger
pre-miRNA
GTTCCAGACACATCTCATCTGATATACAATATTTTCTTAAATTGTATAAAGAGAAATTATTGTACATCGGATGAGCTGTGTCTGGGAT

dot-bracket secondary structure
((((((((((((.((((((((((.(((((((.((((((............)))))).))))))).)))))))))).))))))))))))


SIMILARITIES
miRBase ptr-mir-944: 3e-44

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-944: 7e-33

Identical with: ptr-mir-944 from miRBase (MNEST030629)

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
deep sequencing data evidence

references

[1] Lui WO, Pourmand N, Patterson BK, Fire A, Cancer Res. 67:6031-6043(2007)., "Patterns of known and novel small RNAs in human cervical cancer"




Liczniki na strone;