ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-1178
source: miRBase, original name: hsa-mir-1178 (MI0006271)
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGCTCACTGTTCTTCCCTAG miRNA* AGGGAAGGGTCCAGGGTCAGC mismatches: 8 bulges: 0 |
pre-miRNA
GCGTTGGCTGGCAGAGGAAGGGAAGGGTCCAGGGTCAGCTGAGCATGCCCTCAGGTTGCTCACTGTTCTTCCCTAGAATGTCAGGTGATGT
dot-bracket secondary structure
((((((.((((((.....(((((((..(...((((.(.(((((......))))).).))))...)..)))))))....)))))).))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Subramanian S, Lui WO, Lee CH, Espinosa I, Nielsen TO, Heinrich MC, Corless CL, Fire AZ, van de Rijn M, Oncogene. 27:2015-2026(2008)., "MicroRNA expression signature of human sarcomas"
GCGTTGGCTGGCAGAGGAAGGGAAGGGTCCAGGGTCAGCTGAGCATGCCCTCAGGTTGCTCACTGTTCTTCCCTAGAATGTCAGGTGATGT
dot-bracket secondary structure
((((((.((((((.....(((((((..(...((((.(.(((((......))))).).))))...)..)))))))....)))))).))))))
SIMILARITIES| miRBase ppy-mir-1178: 1e-40 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1178: 2e-39 |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Subramanian S, Lui WO, Lee CH, Espinosa I, Nielsen TO, Heinrich MC, Corless CL, Fire AZ, van de Rijn M, Oncogene. 27:2015-2026(2008)., "MicroRNA expression signature of human sarcomas"
