ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-1179
source: miRBase, original name: hsa-mir-1179 (MI0006272)
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAGCATTCTTTCATTGGTTGG miRNA* AACCAATAAGAGGATGCCATTTA mismatches: 2 bulges: 2 |
pre-miRNA
GGCTGGAAAGGAAGAAGCATTCTTTCATTGGTTGGTGTGTATTGCCTTGTCAACCAATAAGAGGATGCCATTTATCCTTTTCTGACTAGCT
dot-bracket secondary structure
((((((((((((.((((((((((((.((((((((..(..........)..)))))))).)))))))))..))).)))))).....))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Subramanian S, Lui WO, Lee CH, Espinosa I, Nielsen TO, Heinrich MC, Corless CL, Fire AZ, van de Rijn M, Oncogene. 27:2015-2026(2008)., "MicroRNA expression signature of human sarcomas"
GGCTGGAAAGGAAGAAGCATTCTTTCATTGGTTGGTGTGTATTGCCTTGTCAACCAATAAGAGGATGCCATTTATCCTTTTCTGACTAGCT
dot-bracket secondary structure
((((((((((((.((((((((((((.((((((((..(..........)..)))))))).)))))))))..))).)))))).....))))))
SIMILARITIES| miRBase ptr-mir-1179: 4e-46 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: ptr-mir-1179 from miRBase (MNEST030631) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Subramanian S, Lui WO, Lee CH, Espinosa I, Nielsen TO, Heinrich MC, Corless CL, Fire AZ, van de Rijn M, Oncogene. 27:2015-2026(2008)., "MicroRNA expression signature of human sarcomas"
